Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm12636-201ENSMUST00000117395 624 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm12889-201ENSMUST00000118684 241 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm15390-201ENSMUST00000120323 738 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm14826-201ENSMUST00000121284 901 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm13221-201ENSMUST00000121712 430 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm5698-201ENSMUST00000178317 724 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm26436-201ENSMUST00000180325 132 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Snhg7-201ENSMUST00000181621 139 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm27044-201ENSMUST00000183033 796 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm2617-201ENSMUST00000185690 1066 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm28149-201ENSMUST00000187102 378 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm18350-201ENSMUST00000187395 955 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm28768-201ENSMUST00000189034 378 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm29168-201ENSMUST00000189953 687 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm18699-201ENSMUST00000190713 243 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm37581-201ENSMUST00000192371 988 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm44212-201ENSMUST00000205016 897 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm44705-201ENSMUST00000206719 339 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm7499-201ENSMUST00000210423 813 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Sf3b6P59708 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sf3b6P59708 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.75□□□□□ -1.33
Sf3b6P59708 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.75□□□□□ -1.33
Sf3b6P59708 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sf3b6P59708 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.75□□□□□ -1.33
Sf3b6P59708 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3b6P59708 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms