Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm42720-201ENSMUST00000196813 300 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC8.14□□□□□ -1.11
Nub1P54729 Gm42965-201ENSMUST00000201254 250 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.14□□□□□ -1.11
Nub1P54729 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nub1P54729 Gm17850-201ENSMUST00000210023 1154 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC8.14□□□□□ -1.11
Nub1P54729 Gm4120-201ENSMUST00000220456 578 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm7119-201ENSMUST00000221345 695 ntBASIC8.14□□□□□ -1.11
Nub1P54729 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm5374-202ENSMUST00000222910 314 ntBASIC8.14□□□□□ -1.11
Nub1P54729 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm6369-201ENSMUST00000069626 412 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Gm22864-201ENSMUST00000083950 130 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nub1P54729 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Nub1P54729 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Nub1P54729 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nub1P54729 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nub1P54729 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.14□□□□□ -1.11
Nub1P54729 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Nub1P54729 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.14□□□□□ -1.11
Nub1P54729 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nub1P54729 Gm44723-201ENSMUST00000207369 4000 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Nub1P54729 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm25167-201ENSMUST00000104188 120 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm14610-201ENSMUST00000118358 966 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm12387-201ENSMUST00000118573 955 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm13521-201ENSMUST00000118922 866 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm11416-201ENSMUST00000119111 863 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm22687-201ENSMUST00000158301 105 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm24738-201ENSMUST00000158856 123 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm37716-201ENSMUST00000193553 947 ntBASIC8.13□□□□□ -1.11
Nub1P54729 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm43390-201ENSMUST00000196614 421 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm43542-201ENSMUST00000199505 379 ntBASIC8.13□□□□□ -1.11
Nub1P54729 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm7392-201ENSMUST00000217815 345 ntBASIC8.13□□□□□ -1.11
Nub1P54729 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.13□□□□□ -1.11
Nub1P54729 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.13□□□□□ -1.11
Nub1P54729 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.13□□□□□ -1.11
Nub1P54729 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.13□□□□□ -1.11
Nub1P54729 CT030194.2-201ENSMUST00000225752 379 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Mir135b-201ENSMUST00000083501 97 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Nub1P54729 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Nub1P54729 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.13□□□□□ -1.11
Nub1P54729 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nub1P54729 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nub1P54729 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 398.7 ms