Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Ighv1-10-201ENSMUST00000194372 355 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm44809-201ENSMUST00000208305 993 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Gm37255-201ENSMUST00000193302 3060 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC10.48□□□□□ -0.73
Cux1P53564 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm20691-201ENSMUST00000176889 333 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm37380-201ENSMUST00000193752 397 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm34768-201ENSMUST00000193884 565 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm18009-201ENSMUST00000203239 1016 ntBASIC10.48□□□□□ -0.73
Cux1P53564 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.48□□□□□ -0.73
Cux1P53564 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cux1P53564 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cux1P53564 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC10.47□□□□□ -0.73
Cux1P53564 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cux1P53564 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC10.47□□□□□ -0.73
Cux1P53564 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Cux1P53564 AC154806.2-201ENSMUST00000227212 2385 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Cux1P53564 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Dennd6a-204ENSMUST00000224248 2775 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cux1P53564 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gm14712-201ENSMUST00000120195 772 ntBASIC10.47□□□□□ -0.73
Cux1P53564 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gm28455-201ENSMUST00000189105 1290 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gm7499-201ENSMUST00000210423 813 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC10.47□□□□□ -0.73
Cux1P53564 Gm19212-201ENSMUST00000216642 862 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC10.47□□□□□ -0.73
Cux1P53564 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC10.47□□□□□ -0.73
Cux1P53564 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gm42898-201ENSMUST00000200370 3073 ntBASIC10.47□□□□□ -0.73
Cux1P53564 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cux1P53564 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cux1P53564 Gm43285-201ENSMUST00000196563 3592 ntBASIC10.46□□□□□ -0.73
Cux1P53564 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
Cux1P53564 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cux1P53564 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cux1P53564 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cux1P53564 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Cux1P53564 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cux1P53564 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cux1P53564 Gm26079-201ENSMUST00000104066 133 ntBASIC10.46□□□□□ -0.74
Cux1P53564 Gm14745-201ENSMUST00000118480 1096 ntBASIC10.46□□□□□ -0.74
Cux1P53564 Gm14054-201ENSMUST00000120744 704 ntBASIC10.46□□□□□ -0.74
Cux1P53564 Gm26346-201ENSMUST00000157525 329 ntBASIC10.46□□□□□ -0.74
Cux1P53564 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC10.46□□□□□ -0.74
Cux1P53564 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC10.46□□□□□ -0.74
Cux1P53564 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC10.46□□□□□ -0.74
Cux1P53564 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC10.46□□□□□ -0.74
Cux1P53564 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC10.46□□□□□ -0.74
Cux1P53564 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cux1P53564 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cux1P53564 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cux1P53564 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cux1P53564 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cux1P53564 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cux1P53564 Gm43681-201ENSMUST00000201581 1903 ntBASIC10.45□□□□□ -0.74
Cux1P53564 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cux1P53564 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cux1P53564 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cux1P53564 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cux1P53564 Gm7212-201ENSMUST00000120817 348 ntBASIC10.45□□□□□ -0.74
Cux1P53564 Gm26037-201ENSMUST00000158150 311 ntBASIC10.45□□□□□ -0.74
Cux1P53564 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cux1P53564 Gm27853-201ENSMUST00000184176 250 ntBASIC10.45□□□□□ -0.74
Cux1P53564 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms