Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm18637-201ENSMUST00000217665 1900 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Rorc-202ENSMUST00000197040 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 AC153526.3-201ENSMUST00000220145 2183 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Cdk15-202ENSMUST00000160662 2108 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Tacr3-201ENSMUST00000029822 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm45714-201ENSMUST00000211466 2722 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm38365-201ENSMUST00000195720 2993 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Arsg-201ENSMUST00000020928 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm25608-201ENSMUST00000104021 132 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Mir466n-201ENSMUST00000104798 94 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm9836-201ENSMUST00000117132 216 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm11869-201ENSMUST00000118701 329 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm12222-201ENSMUST00000121368 260 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm15899-201ENSMUST00000128586 238 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm16212-201ENSMUST00000136190 282 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm3275-201ENSMUST00000169145 487 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm23269-201ENSMUST00000178701 107 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm24969-201ENSMUST00000180331 79 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm26942-201ENSMUST00000182854 797 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm5313-201ENSMUST00000182893 987 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm27964-201ENSMUST00000185195 62 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC6.59□□□□□ -1.35
Hoxd3P09027 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm37108-201ENSMUST00000194605 626 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm43383-201ENSMUST00000195981 469 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm43797-201ENSMUST00000198221 532 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Igkv8-22-201ENSMUST00000199501 367 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm43276-201ENSMUST00000199712 364 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm20072-201ENSMUST00000202231 292 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm8774-201ENSMUST00000203621 692 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm44451-201ENSMUST00000203767 483 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm2734-201ENSMUST00000208561 743 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm44892-201ENSMUST00000208595 488 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm33882-201ENSMUST00000208990 651 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm46344-201ENSMUST00000220530 887 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm18243-201ENSMUST00000220756 887 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm4057-201ENSMUST00000221407 368 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 AC134917.3-201ENSMUST00000222057 1283 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 AC167013.3-201ENSMUST00000228110 989 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm4953-201ENSMUST00000077309 483 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm24917-201ENSMUST00000083935 104 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxd3P09027 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.59□□□□□ -1.35
Hoxd3P09027 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms