Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm24173-201ENSMUST00000104130 128 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm13400-201ENSMUST00000117436 380 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm4660-201ENSMUST00000131499 403 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm22518-201ENSMUST00000158267 68 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm43725-201ENSMUST00000200122 369 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm38840-201ENSMUST00000204716 843 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm45448-201ENSMUST00000211739 209 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm18586-201ENSMUST00000217265 518 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 AC166574.3-201ENSMUST00000226725 367 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm37518-201ENSMUST00000194930 2603 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm22523-201ENSMUST00000158696 100 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm6055-201ENSMUST00000180532 378 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm5260-201ENSMUST00000186157 949 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gm10205-201ENSMUST00000087431 234 ntBASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc180J3QNE4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm11902-201ENSMUST00000118849 270 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm4997-201ENSMUST00000154056 360 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm7891-201ENSMUST00000190284 843 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 AC154795.1-201ENSMUST00000225611 364 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 AC123656.1-201ENSMUST00000227121 581 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm26442-201ENSMUST00000082588 153 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm38077-201ENSMUST00000193657 3245 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Gm6101-201ENSMUST00000195384 1867 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 CT010470.1-201ENSMUST00000225364 1876 ntBASIC12.5□□□□□ -0.41
Ccdc180J3QNE4 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm43537-201ENSMUST00000199064 3110 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm38386-201ENSMUST00000194293 3421 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm21392-201ENSMUST00000182950 972 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm29509-201ENSMUST00000185716 321 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm35323-201ENSMUST00000191836 499 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Ighv1-10-201ENSMUST00000194372 355 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm18430-201ENSMUST00000197534 682 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms