Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm24173-201ENSMUST00000104130 128 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm22371-201ENSMUST00000104588 130 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm13006-201ENSMUST00000118683 214 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm13455-201ENSMUST00000118767 517 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm27210-201ENSMUST00000184263 402 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Mir7008-201ENSMUST00000184398 63 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm14805-201ENSMUST00000120172 340 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm31861-201ENSMUST00000204563 672 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm8526-201ENSMUST00000079153 475 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.03□□□□□ -1.28
Col4a6B1AVK5 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.03□□□□□ -1.28
Col4a6B1AVK5 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Col4a6B1AVK5 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
Col4a6B1AVK5 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Col4a6B1AVK5 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm12643-201ENSMUST00000116078 374 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm7952-201ENSMUST00000180540 984 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm5119-201ENSMUST00000215858 634 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm5612-201ENSMUST00000053326 375 ntBASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms