Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm29357-201ENSMUST00000186877 698 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm28546-201ENSMUST00000188221 615 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm28341-201ENSMUST00000190883 472 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm5119-201ENSMUST00000215858 634 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb3S4R1G7 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm23485-201ENSMUST00000104181 155 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm13163-201ENSMUST00000119875 336 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm7991-201ENSMUST00000168668 591 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm6536-201ENSMUST00000171180 615 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm7481-201ENSMUST00000182020 995 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm43013-201ENSMUST00000198216 247 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm42734-201ENSMUST00000201656 878 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm45739-201ENSMUST00000213094 388 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 AC153968.2-201ENSMUST00000215579 1140 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm21089-201ENSMUST00000215843 325 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm24046-201ENSMUST00000083111 165 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.31□□□□□ -1.4
H2afb3S4R1G7 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
H2afb3S4R1G7 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms