Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm26323-201ENSMUST00000157743 175 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm3208-201ENSMUST00000168281 427 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm28614-201ENSMUST00000186483 458 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ighv10-4-201ENSMUST00000193702 299 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm8921-201ENSMUST00000204306 649 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm29977-201ENSMUST00000206804 724 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm44865-201ENSMUST00000207240 531 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm7419-201ENSMUST00000209962 925 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm34424-201ENSMUST00000213400 782 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm36758-201ENSMUST00000222594 310 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm18960-201ENSMUST00000222962 713 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 CT030194.1-201ENSMUST00000225507 532 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr683-201ENSMUST00000061284 960 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm22865-201ENSMUST00000083949 214 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm23834-201ENSMUST00000104436 129 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm17170-201ENSMUST00000112785 316 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm11865-201ENSMUST00000118093 859 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm12072-201ENSMUST00000118293 715 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm8644-201ENSMUST00000118619 596 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm13006-201ENSMUST00000118683 214 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm8916-201ENSMUST00000119732 949 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm14990-201ENSMUST00000122354 445 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm26182-201ENSMUST00000157688 116 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm27401-201ENSMUST00000184052 173 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Mir7115-201ENSMUST00000184275 64 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm27972-201ENSMUST00000184720 137 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm5147-201ENSMUST00000185999 794 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm37871-201ENSMUST00000194973 688 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm42558-201ENSMUST00000200982 265 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm43974-201ENSMUST00000205080 684 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm44982-201ENSMUST00000208795 471 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm6885-201ENSMUST00000217261 372 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm19217-201ENSMUST00000218238 328 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx56Q9D0R4 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.52□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms