Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm13900-201ENSMUST00000119402 498 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm11850-201ENSMUST00000119679 479 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm15188-201ENSMUST00000121264 704 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm12929-201ENSMUST00000122406 370 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm22882-201ENSMUST00000157749 124 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm23139-201ENSMUST00000179454 132 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm28070-201ENSMUST00000191502 445 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm37017-201ENSMUST00000195266 747 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm4525-201ENSMUST00000198831 254 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm44192-201ENSMUST00000204195 556 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm44279-201ENSMUST00000205154 472 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm17611-202ENSMUST00000220613 814 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Smc1aQ9CU62 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
Smc1aQ9CU62 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.77□□□□□ -1.16
Smc1aQ9CU62 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.77□□□□□ -1.16
Smc1aQ9CU62 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
Smc1aQ9CU62 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Smc1aQ9CU62 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm13423-201ENSMUST00000117205 888 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm13221-201ENSMUST00000121712 430 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm24155-201ENSMUST00000175259 110 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Mir8105-201ENSMUST00000184718 89 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm19480-201ENSMUST00000185547 667 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm28117-201ENSMUST00000188472 371 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm36928-201ENSMUST00000192466 694 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm37349-201ENSMUST00000194205 624 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm37526-201ENSMUST00000194640 619 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm37325-201ENSMUST00000194971 694 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm3549-201ENSMUST00000203873 794 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 600.5 ms