Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm24286-201ENSMUST00000157632 128 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Mir3072-201ENSMUST00000175610 83 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28117-201ENSMUST00000188472 371 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm3841-201ENSMUST00000191399 451 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm31579-201ENSMUST00000203306 966 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm17611-202ENSMUST00000220613 814 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdk5rap3Q99LM2 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm22661-201ENSMUST00000104192 132 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm14550-201ENSMUST00000117918 407 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm11865-201ENSMUST00000118093 859 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm12630-201ENSMUST00000121575 784 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm20813-201ENSMUST00000186646 705 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm21923-201ENSMUST00000188455 696 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm43812-202ENSMUST00000202701 581 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cdk5rap3Q99LM2 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms