Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm23031-201ENSMUST00000157998 119 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm6489-201ENSMUST00000178167 696 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm18875-201ENSMUST00000188563 882 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm6077-201ENSMUST00000196008 499 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm22711-202ENSMUST00000197029 135 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm44590-201ENSMUST00000206161 391 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm45478-201ENSMUST00000209472 211 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm24405-201ENSMUST00000083033 167 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Lrif1Q8CDD9 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Lrif1Q8CDD9 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm15153-201ENSMUST00000119867 274 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm22025-201ENSMUST00000122734 302 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm7651-201ENSMUST00000173398 901 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm22702-201ENSMUST00000175372 69 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm18848-201ENSMUST00000182069 792 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Pea15b-201ENSMUST00000182806 387 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Olfr683-201ENSMUST00000061284 960 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Mir455-201ENSMUST00000093594 82 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms