Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm12447-201ENSMUST00000119110 470 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm6142-201ENSMUST00000120290 325 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm15349-201ENSMUST00000121154 204 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm8715-201ENSMUST00000162728 531 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm6726-201ENSMUST00000172786 681 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm20432-201ENSMUST00000173716 250 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm26587-201ENSMUST00000180795 989 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm24411-201ENSMUST00000083428 131 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Atg4aQ8C9S8 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm2178-201ENSMUST00000104927 357 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm16330-201ENSMUST00000128324 297 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm26321-201ENSMUST00000157740 242 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm44147-201ENSMUST00000204658 94 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm35619-201ENSMUST00000222548 600 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.25□□□□□ -1.09
Atg4aQ8C9S8 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms