Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm25178-201ENSMUST00000122633 325 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm22024-201ENSMUST00000122733 287 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm24738-201ENSMUST00000158856 123 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm28952-201ENSMUST00000189285 681 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm37322-201ENSMUST00000193409 337 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm43590-201ENSMUST00000195987 387 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm5309-201ENSMUST00000197416 677 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm44833-201ENSMUST00000208368 331 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.31□□□□□ -1.08
Gm28047Q3US59 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm28047Q3US59 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm23529-201ENSMUST00000104562 132 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm8858-201ENSMUST00000118259 342 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm8644-201ENSMUST00000118619 596 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm14016-201ENSMUST00000119095 486 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm14787-201ENSMUST00000121236 388 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm13460-201ENSMUST00000121274 353 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm24139-201ENSMUST00000122780 288 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm17097-201ENSMUST00000166414 714 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm5272-201ENSMUST00000182730 982 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm28428-201ENSMUST00000188886 697 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm38328-201ENSMUST00000195582 317 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm43725-201ENSMUST00000200122 369 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm43226-201ENSMUST00000202438 259 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm18689-201ENSMUST00000203969 902 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm5154-201ENSMUST00000203971 399 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm44919-201ENSMUST00000208587 1073 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm45478-201ENSMUST00000209472 211 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm22977-201ENSMUST00000082615 107 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.3□□□□□ -1.08
Gm28047Q3US59 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Gm28047Q3US59 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms