Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Usp39Q3TIX9 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Mir503-201ENSMUST00000102168 71 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm23701-201ENSMUST00000103893 110 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm26143-201ENSMUST00000104480 108 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm14480-201ENSMUST00000118521 433 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm13006-201ENSMUST00000118683 214 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm11850-201ENSMUST00000119679 479 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm14787-201ENSMUST00000121236 388 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm22552-201ENSMUST00000157796 337 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm8715-201ENSMUST00000162728 531 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm17046-201ENSMUST00000168078 850 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm22702-201ENSMUST00000175372 69 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm23617-201ENSMUST00000175410 95 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm20690-201ENSMUST00000177341 315 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm20111-201ENSMUST00000184830 319 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm5147-201ENSMUST00000185999 794 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm17838-201ENSMUST00000205872 876 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm44566-201ENSMUST00000207638 304 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm44982-201ENSMUST00000208795 471 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm19095-201ENSMUST00000220533 730 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp39Q3TIX9 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Gm12459-201ENSMUST00000120659 356 ntBASIC6.9□□□□□ -1.3
Usp39Q3TIX9 Gm15644-201ENSMUST00000121764 387 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms