Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37150-201ENSMUST00000193900 2754 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm36993-201ENSMUST00000192983 2980 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm22953-201ENSMUST00000116724 101 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm13750-201ENSMUST00000117621 465 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm13806-201ENSMUST00000117822 325 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm11903-201ENSMUST00000118958 727 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm12577-201ENSMUST00000119701 574 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm15009-201ENSMUST00000121387 322 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm24383-201ENSMUST00000122691 333 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm15878-201ENSMUST00000127561 306 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm25557-201ENSMUST00000158084 315 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm25037-201ENSMUST00000175418 110 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Mir3085-201ENSMUST00000175493 89 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm27218-201ENSMUST00000183745 392 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Mir8105-201ENSMUST00000184718 89 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm38079-201ENSMUST00000195603 154 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm45100-201ENSMUST00000209153 391 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr471-201ENSMUST00000210091 936 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.44□□□□□ -1.38
Col8a1Q00780 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 AC124397.1-201ENSMUST00000224296 653 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 AC162857.1-201ENSMUST00000226614 400 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm29486-201ENSMUST00000088648 372 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm17821-201ENSMUST00000223448 1693 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.44□□□□□ -1.38
Col8a1Q00780 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col8a1Q00780 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cblb-205ENSMUST00000227756 3378 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms