Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SgcaP82350 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcaP82350 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcaP82350 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.79□□□□□ -1.48
SgcaP82350 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcaP82350 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcaP82350 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SgcaP82350 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SgcaP82350 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm14032-201ENSMUST00000117686 1026 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm13940-201ENSMUST00000121023 301 ntBASIC5.78□□□□□ -1.48
SgcaP82350 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.78□□□□□ -1.48
SgcaP82350 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SgcaP82350 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm26408-201ENSMUST00000157672 127 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm4252-201ENSMUST00000174823 313 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm7678-201ENSMUST00000181879 943 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm9167-201ENSMUST00000182469 962 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm27542-201ENSMUST00000184184 256 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm8925-201ENSMUST00000197212 763 ntBASIC5.78□□□□□ -1.48
SgcaP82350 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm18765-201ENSMUST00000203166 660 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcaP82350 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm18601-201ENSMUST00000220831 634 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm5668-201ENSMUST00000220897 436 ntBASIC5.78□□□□□ -1.48
SgcaP82350 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 AV026068-225ENSMUST00000225042 490 ntBASIC5.78□□□□□ -1.48
SgcaP82350 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.78□□□□□ -1.48
SgcaP82350 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.78□□□□□ -1.48
SgcaP82350 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcaP82350 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcaP82350 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
SgcaP82350 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
SgcaP82350 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcaP82350 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcaP82350 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.77□□□□□ -1.49
SgcaP82350 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcaP82350 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.77□□□□□ -1.49
SgcaP82350 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SgcaP82350 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcaP82350 Mir704-201ENSMUST00000102106 77 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Mir678-201ENSMUST00000102114 84 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
SgcaP82350 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcaP82350 Gm13930-201ENSMUST00000118569 368 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.77□□□□□ -1.49
SgcaP82350 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.77□□□□□ -1.49
SgcaP82350 Gm17129-201ENSMUST00000168168 505 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Gm8974-201ENSMUST00000175770 479 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Gm24307-201ENSMUST00000178512 101 ntBASIC5.77□□□□□ -1.49
SgcaP82350 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcaP82350 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.77□□□□□ -1.49
SgcaP82350 Gm42673-201ENSMUST00000202676 337 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC5.77□□□□□ -1.49
SgcaP82350 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC5.77□□□□□ -1.49
SgcaP82350 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.77□□□□□ -1.49
SgcaP82350 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms