Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm32842-201ENSMUST00000212653 738 ntBASIC7.12□□□□□ -1.27
Nup43P59235 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.12□□□□□ -1.27
Nup43P59235 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 AV026068-219ENSMUST00000224148 933 ntBASIC7.12□□□□□ -1.27
Nup43P59235 AV026068-220ENSMUST00000224153 1147 ntBASIC7.12□□□□□ -1.27
Nup43P59235 AC122937.1-201ENSMUST00000226405 793 ntBASIC7.12□□□□□ -1.27
Nup43P59235 AC112972.1-201ENSMUST00000227329 365 ntBASIC7.12□□□□□ -1.27
Nup43P59235 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Nup43P59235 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Nup43P59235 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Nup43P59235 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.12□□□□□ -1.27
Nup43P59235 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.12□□□□□ -1.27
Nup43P59235 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.12□□□□□ -1.27
Nup43P59235 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Nup43P59235 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Nup43P59235 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.11□□□□□ -1.27
Nup43P59235 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm23484-201ENSMUST00000104178 131 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm11896-201ENSMUST00000121105 820 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm11990-201ENSMUST00000121505 897 ntBASIC7.11□□□□□ -1.27
Nup43P59235 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm23079-201ENSMUST00000157847 117 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm26991-201ENSMUST00000180950 620 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm27160-201ENSMUST00000184837 199 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm6610-201ENSMUST00000186324 358 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm4412-201ENSMUST00000186660 433 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm6445-201ENSMUST00000189515 1112 ntBASIC7.11□□□□□ -1.27
Nup43P59235 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm43590-201ENSMUST00000195987 387 ntBASIC7.11□□□□□ -1.27
Nup43P59235 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm5586-201ENSMUST00000206264 795 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm5080-201ENSMUST00000220341 743 ntBASIC7.11□□□□□ -1.27
Nup43P59235 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC7.11□□□□□ -1.27
Nup43P59235 AC117797.2-201ENSMUST00000224419 531 ntBASIC7.11□□□□□ -1.27
Nup43P59235 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.11□□□□□ -1.27
Nup43P59235 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.11□□□□□ -1.27
Nup43P59235 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup43P59235 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup43P59235 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup43P59235 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Nup43P59235 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Nup43P59235 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Nup43P59235 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.11□□□□□ -1.27
Nup43P59235 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.11□□□□□ -1.27
Nup43P59235 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Nup43P59235 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms