Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
P20040 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
P20040 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
P20040 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.11□□□□□ -1.43
P20040 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.11□□□□□ -1.43
P20040 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
P20040 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.11□□□□□ -1.43
P20040 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.11□□□□□ -1.43
P20040 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.11□□□□□ -1.43
P20040 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
P20040 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
P20040 Gm15105-201ENSMUST00000117777 204 ntBASIC6.11□□□□□ -1.43
P20040 Gm13486-201ENSMUST00000119910 282 ntBASIC6.11□□□□□ -1.43
P20040 Gm11263-201ENSMUST00000121853 749 ntBASIC6.11□□□□□ -1.43
P20040 Gm5272-201ENSMUST00000182730 982 ntBASIC6.11□□□□□ -1.43
P20040 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.11□□□□□ -1.43
P20040 Gm18501-201ENSMUST00000185363 664 ntBASIC6.11□□□□□ -1.43
P20040 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm43147-201ENSMUST00000196944 542 ntBASIC6.11□□□□□ -1.43
P20040 Gm44971-201ENSMUST00000206192 337 ntBASIC6.11□□□□□ -1.43
P20040 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.11□□□□□ -1.43
P20040 Gm20136-201ENSMUST00000207501 891 ntBASIC6.11□□□□□ -1.43
P20040 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Gm7368-201ENSMUST00000213307 367 ntBASIC6.11□□□□□ -1.43
P20040 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.11□□□□□ -1.43
P20040 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.11□□□□□ -1.43
P20040 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.11□□□□□ -1.43
P20040 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.11□□□□□ -1.43
P20040 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
P20040 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.11□□□□□ -1.43
P20040 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.11□□□□□ -1.43
P20040 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
P20040 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
P20040 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.1□□□□□ -1.43
P20040 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
P20040 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.1□□□□□ -1.43
P20040 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
P20040 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
P20040 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.1□□□□□ -1.43
P20040 Gm13940-201ENSMUST00000121023 301 ntBASIC6.1□□□□□ -1.43
P20040 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.1□□□□□ -1.43
P20040 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.1□□□□□ -1.43
P20040 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.1□□□□□ -1.43
P20040 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Gm26607-201ENSMUST00000180661 867 ntBASIC6.1□□□□□ -1.43
P20040 Gm26587-201ENSMUST00000180795 989 ntBASIC6.1□□□□□ -1.43
P20040 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.1□□□□□ -1.43
P20040 Mir378d-201ENSMUST00000184232 110 ntBASIC6.1□□□□□ -1.43
P20040 Mir6357-201ENSMUST00000184246 104 ntBASIC6.1□□□□□ -1.43
P20040 Mir7058-201ENSMUST00000184637 75 ntBASIC6.1□□□□□ -1.43
P20040 Gm5261-201ENSMUST00000185860 713 ntBASIC6.1□□□□□ -1.43
P20040 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.1□□□□□ -1.43
P20040 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.1□□□□□ -1.43
P20040 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.1□□□□□ -1.43
P20040 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.1□□□□□ -1.43
P20040 Gm5305-201ENSMUST00000204010 746 ntBASIC6.1□□□□□ -1.43
P20040 Gm44722-201ENSMUST00000206473 436 ntBASIC6.1□□□□□ -1.43
P20040 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.1□□□□□ -1.43
P20040 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms