Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm13137-201ENSMUST00000118035 345 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm13006-201ENSMUST00000118683 214 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm11903-201ENSMUST00000118958 727 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm20690-201ENSMUST00000177341 315 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm9556-201ENSMUST00000182938 940 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm37328-201ENSMUST00000193191 640 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm2221-201ENSMUST00000209342 418 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.48□□□□□ -1.21
Chmp6P0C0A3 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm7599-201ENSMUST00000121453 796 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm6434-201ENSMUST00000163316 372 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm3760-201ENSMUST00000167475 804 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm4373-201ENSMUST00000178571 556 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Chmp6P0C0A3 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.46□□□□□ -1.21
Chmp6P0C0A3 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Chmp6P0C0A3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Chmp6P0C0A3 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
Chmp6P0C0A3 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.46□□□□□ -1.21
Chmp6P0C0A3 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Chmp6P0C0A3 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm14631-201ENSMUST00000119067 594 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm13754-201ENSMUST00000120486 998 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm11962-201ENSMUST00000145746 255 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms