Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm15403-201ENSMUST00000119343 1227 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm13900-201ENSMUST00000119402 498 ntBASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Gm23467-201ENSMUST00000157127 159 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm23082-201ENSMUST00000157852 133 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC10.8□□□□□ -0.68
NclP09405 Gm23633-201ENSMUST00000175293 119 ntBASIC10.8□□□□□ -0.68
NclP09405 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm29663-201ENSMUST00000186962 853 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm29383-201ENSMUST00000188284 480 ntBASIC10.8□□□□□ -0.68
NclP09405 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC10.8□□□□□ -0.68
NclP09405 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC10.8□□□□□ -0.68
NclP09405 Gm34144-201ENSMUST00000197039 259 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC10.8□□□□□ -0.68
NclP09405 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC10.8□□□□□ -0.68
NclP09405 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC10.8□□□□□ -0.68
NclP09405 CT009733.1-203ENSMUST00000224033 451 ntBASIC10.8□□□□□ -0.68
NclP09405 AV026068-219ENSMUST00000224148 933 ntBASIC10.8□□□□□ -0.68
NclP09405 AV026068-220ENSMUST00000224153 1147 ntBASIC10.8□□□□□ -0.68
NclP09405 AV026068-224ENSMUST00000224827 928 ntBASIC10.8□□□□□ -0.68
NclP09405 AC162183.1-202ENSMUST00000225434 904 ntBASIC10.8□□□□□ -0.68
NclP09405 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC10.8□□□□□ -0.68
NclP09405 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC10.8□□□□□ -0.68
NclP09405 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NclP09405 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NclP09405 Gm12346-201ENSMUST00000121455 2255 ntBASIC10.8□□□□□ -0.68
NclP09405 Gm37940-201ENSMUST00000194243 3251 ntBASIC10.8□□□□□ -0.68
NclP09405 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NclP09405 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 AC166574.1-201ENSMUST00000226916 1309 ntBASIC10.8□□□□□ -0.68
NclP09405 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NclP09405 AC159301.1-202ENSMUST00000225860 2133 ntBASIC10.79□□□□□ -0.68
NclP09405 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Gm37321-201ENSMUST00000195742 1872 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm22231-201ENSMUST00000101027 73 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm22707-201ENSMUST00000103834 110 ntBASIC10.79□□□□□ -0.68
NclP09405 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Gm13260-201ENSMUST00000117797 1264 ntBASIC10.79□□□□□ -0.68
NclP09405 Klra14-ps-201ENSMUST00000119532 802 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm11689-201ENSMUST00000120766 302 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm12477-201ENSMUST00000121221 571 ntBASIC10.79□□□□□ -0.68
NclP09405 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Gm6428-201ENSMUST00000161062 345 ntBASIC10.79□□□□□ -0.68
NclP09405 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm25640-201ENSMUST00000175378 125 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm2539-203ENSMUST00000181352 746 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm5272-201ENSMUST00000182730 982 ntBASIC10.79□□□□□ -0.68
NclP09405 Mir378d-201ENSMUST00000184232 110 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC10.79□□□□□ -0.68
NclP09405 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC10.79□□□□□ -0.68
NclP09405 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm44566-201ENSMUST00000207638 304 ntBASIC10.79□□□□□ -0.68
NclP09405 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Gm19201-201ENSMUST00000210127 778 ntBASIC10.79□□□□□ -0.68
NclP09405 Gm45497-201ENSMUST00000211701 740 ntBASIC10.79□□□□□ -0.68
NclP09405 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC10.79□□□□□ -0.68
NclP09405 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC10.79□□□□□ -0.68
NclP09405 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
NclP09405 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
NclP09405 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
NclP09405 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
NclP09405 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
NclP09405 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NclP09405 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
NclP09405 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NclP09405 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NclP09405 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC10.78□□□□□ -0.68
NclP09405 Gm44769-201ENSMUST00000206120 2809 ntBASIC10.78□□□□□ -0.68
NclP09405 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NclP09405 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
NclP09405 Gm5841-201ENSMUST00000195307 2177 ntBASIC10.78□□□□□ -0.68
NclP09405 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NclP09405 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC10.78□□□□□ -0.68
NclP09405 Gm12879-201ENSMUST00000120003 1182 ntBASIC10.78□□□□□ -0.68
NclP09405 Gm14417-201ENSMUST00000120036 1074 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms