Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tmf1B9EKI3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tmf1B9EKI3 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm14772-201ENSMUST00000116562 514 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm14513-201ENSMUST00000117403 123 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm13141-201ENSMUST00000117417 456 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm11370-201ENSMUST00000120583 260 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm24176-201ENSMUST00000158928 121 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm19185-201ENSMUST00000196365 643 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 AW822073-201ENSMUST00000075305 555 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.39□□□□□ -0.91
Tmf1B9EKI3 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.39□□□□□ -0.91
Tmf1B9EKI3 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Grik1-209ENSMUST00000227986 2942 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm14000-201ENSMUST00000118670 233 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm23617-201ENSMUST00000175410 95 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm29357-201ENSMUST00000186877 698 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm7867-201ENSMUST00000189856 546 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm44227-201ENSMUST00000203576 241 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm4042-201ENSMUST00000216946 637 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tmf1B9EKI3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm37525-201ENSMUST00000193499 2871 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm25093-201ENSMUST00000103993 132 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm2178-201ENSMUST00000104927 357 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm25395-201ENSMUST00000157343 272 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm25342-201ENSMUST00000157459 122 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm23276-201ENSMUST00000157913 138 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Gm29141-201ENSMUST00000190357 882 ntBASIC9.37□□□□□ -0.91
Tmf1B9EKI3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms