Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm7700-201ENSMUST00000120273 970 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm25374-201ENSMUST00000158158 101 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm9064-201ENSMUST00000163579 566 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm17366-201ENSMUST00000167629 187 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm27972-201ENSMUST00000184720 137 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm6693-201ENSMUST00000189583 813 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm37380-201ENSMUST00000193752 397 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm45690-201ENSMUST00000210775 246 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm19212-201ENSMUST00000216642 862 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Gm19195-201ENSMUST00000222018 511 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm11533-201ENSMUST00000120287 477 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm27460-201ENSMUST00000184213 100 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm43850-201ENSMUST00000202021 578 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm18838-201ENSMUST00000204855 886 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a6B1AVK5 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms