Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm38386-201ENSMUST00000194293 3421 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm5125-201ENSMUST00000148614 624 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm5928-201ENSMUST00000221839 466 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm37956-201ENSMUST00000195208 2010 ntBASIC5.84□□□□□ -1.47
Col6a4A2AX52 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a4A2AX52 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm24069-201ENSMUST00000104512 127 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm7113-201ENSMUST00000120477 958 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm20401-201ENSMUST00000173717 212 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm28918-201ENSMUST00000188822 699 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm45185-201ENSMUST00000207556 404 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm18112-201ENSMUST00000219862 1195 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm2840-201ENSMUST00000048361 411 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm24434-201ENSMUST00000104081 132 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm12959-201ENSMUST00000119396 403 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm24756-201ENSMUST00000177002 96 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm37135-201ENSMUST00000192652 534 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm45514-201ENSMUST00000211531 689 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC165260.6-204ENSMUST00000225571 3508 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Gm37373-201ENSMUST00000194005 2812 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 AC154806.2-201ENSMUST00000227212 2385 ntBASIC5.83□□□□□ -1.48
Col6a4A2AX52 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a4A2AX52 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm23311-201ENSMUST00000104152 134 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm13462-201ENSMUST00000121472 961 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm3140-201ENSMUST00000163523 481 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms