Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm25396-201ENSMUST00000103981 133 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm15739-201ENSMUST00000118049 872 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm15616-201ENSMUST00000118662 375 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm15153-201ENSMUST00000119867 274 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm13486-201ENSMUST00000119910 282 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm23077-201ENSMUST00000157854 116 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm23018-201ENSMUST00000177928 109 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Mir7058-201ENSMUST00000184637 75 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm5261-201ENSMUST00000185860 713 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm5147-201ENSMUST00000185999 794 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm37349-201ENSMUST00000194205 624 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm8275-201ENSMUST00000219732 424 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim3Q9R1R2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm13940-201ENSMUST00000121023 301 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm22275-201ENSMUST00000122470 310 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm23740-201ENSMUST00000157385 100 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm2976-201ENSMUST00000160362 513 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms