Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nedd4l-204ENSMUST00000224347 3150 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm14509-201ENSMUST00000117312 1286 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Klra11-ps-201ENSMUST00000122033 810 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm4835-201ENSMUST00000155839 972 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm22636-201ENSMUST00000158142 275 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm20797-201ENSMUST00000177894 383 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm5181-201ENSMUST00000183140 971 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm6610-201ENSMUST00000186324 358 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm29562-201ENSMUST00000190113 904 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm37837-201ENSMUST00000191743 604 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm37884-201ENSMUST00000191857 818 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm42932-201ENSMUST00000197280 744 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm8575-201ENSMUST00000210262 521 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm19232-201ENSMUST00000211621 652 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm18960-201ENSMUST00000222962 713 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Snora9-201ENSMUST00000082579 133 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Ube3bQ9ES34 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
Ube3bQ9ES34 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm23834-201ENSMUST00000104436 129 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm6746-201ENSMUST00000108774 483 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm5228-201ENSMUST00000117186 357 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm15766-201ENSMUST00000118025 813 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm12632-201ENSMUST00000121223 495 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm13828-201ENSMUST00000122278 363 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm27317-201ENSMUST00000183533 95 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Mir6972-201ENSMUST00000184774 64 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm37729-201ENSMUST00000194761 1172 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm37585-201ENSMUST00000195440 280 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm44705-201ENSMUST00000206719 339 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm18127-201ENSMUST00000208479 725 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm44982-201ENSMUST00000208795 471 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm9973-202ENSMUST00000220926 166 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm40853-201ENSMUST00000221342 582 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms