Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12632-201ENSMUST00000121223 495 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm15488-201ENSMUST00000121682 670 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm11838-201ENSMUST00000121999 231 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm11188-201ENSMUST00000122382 388 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm8529-201ENSMUST00000183298 745 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Mir6919-201ENSMUST00000185146 62 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm38203-201ENSMUST00000191815 245 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm8925-201ENSMUST00000197212 763 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Mir1892-201ENSMUST00000197752 80 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm43884-201ENSMUST00000204251 559 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 AC124542.1-201ENSMUST00000205588 908 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm5418-201ENSMUST00000206932 528 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm18469-201ENSMUST00000208850 439 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm45432-201ENSMUST00000210391 416 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm8058-201ENSMUST00000217247 587 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm18243-201ENSMUST00000220756 887 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 AC134864.1-201ENSMUST00000226326 511 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm25926-201ENSMUST00000082899 160 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm26014-201ENSMUST00000104405 132 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm3931-201ENSMUST00000119038 455 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm12577-201ENSMUST00000119701 574 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm15730-201ENSMUST00000121828 415 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm14380-201ENSMUST00000122298 431 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm24011-201ENSMUST00000157732 268 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm25692-201ENSMUST00000175444 125 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm27542-201ENSMUST00000184184 256 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm29175-201ENSMUST00000189500 402 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm37506-201ENSMUST00000192008 143 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm38078-201ENSMUST00000192771 392 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm37438-201ENSMUST00000192813 393 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Trav12-4-201ENSMUST00000200663 271 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm2089-201ENSMUST00000218294 479 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm4822-201ENSMUST00000077551 479 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms