Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cdk5rap3Q99LM2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Mir1907-201ENSMUST00000122509 90 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm26480-201ENSMUST00000122619 297 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm23031-201ENSMUST00000157998 119 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28665-201ENSMUST00000189269 670 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm18430-201ENSMUST00000197534 682 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Snora9-201ENSMUST00000082579 133 ntBASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cdk5rap3Q99LM2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm24986-201ENSMUST00000104452 132 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm4911-201ENSMUST00000119388 945 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm5809-201ENSMUST00000121854 529 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm23079-201ENSMUST00000157847 117 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm23139-201ENSMUST00000179454 132 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Mir7084-201ENSMUST00000183876 70 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44111-201ENSMUST00000204649 399 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44258-201ENSMUST00000204925 301 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44565-201ENSMUST00000208194 269 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7731-201ENSMUST00000091759 470 ntBASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cdk5rap3Q99LM2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms