Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm14070-201ENSMUST00000120773 428 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm24442-201ENSMUST00000157238 327 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm27507-201ENSMUST00000184199 93 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm28114-201ENSMUST00000187232 379 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm21728-201ENSMUST00000188442 695 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm21889-201ENSMUST00000188487 695 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20932-201ENSMUST00000189115 694 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm21920-201ENSMUST00000190042 695 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm19185-201ENSMUST00000196365 643 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm18914-201ENSMUST00000214625 616 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm24473-201ENSMUST00000104483 131 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm14728-201ENSMUST00000122196 492 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm8577-201ENSMUST00000122420 986 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm23077-201ENSMUST00000157854 116 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm16138-201ENSMUST00000159341 821 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm2976-201ENSMUST00000160362 513 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29048-201ENSMUST00000185342 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29403-201ENSMUST00000185491 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28234-201ENSMUST00000185657 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28248-201ENSMUST00000186093 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29633-202ENSMUST00000186217 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28829-201ENSMUST00000186231 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28261-201ENSMUST00000186417 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28815-201ENSMUST00000186751 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28608-201ENSMUST00000186860 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28122-201ENSMUST00000187088 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28420-201ENSMUST00000187340 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28106-201ENSMUST00000187640 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28698-201ENSMUST00000187734 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29224-201ENSMUST00000187965 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29189-201ENSMUST00000188018 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29476-201ENSMUST00000188397 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29505-201ENSMUST00000188424 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28125-201ENSMUST00000188470 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28117-201ENSMUST00000188472 371 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29391-201ENSMUST00000188545 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29280-201ENSMUST00000188571 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28349-201ENSMUST00000188590 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm29652-201ENSMUST00000188622 615 ntBASIC7.03□□□□□ -1.28
Trub1Q8C0D0 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trub1Q8C0D0 Gm28819-206ENSMUST00000188816 615 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms