Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir425-201ENSMUST00000083645 85 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm43876-201ENSMUST00000203831 3229 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm15750-201ENSMUST00000120970 616 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm12504-202ENSMUST00000148026 306 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm27295-201ENSMUST00000184264 153 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.69□□□□□ -0.86
Usp47Q8BY87 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp47Q8BY87 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm12653-201ENSMUST00000117778 561 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm13930-201ENSMUST00000118569 368 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm12135-201ENSMUST00000119170 466 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm4992-201ENSMUST00000120256 768 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm22523-201ENSMUST00000158696 100 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm16298-201ENSMUST00000161107 420 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm3841-201ENSMUST00000191399 451 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm8190-201ENSMUST00000199603 586 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 AC156016.2-201ENSMUST00000228200 525 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.68□□□□□ -0.86
Usp47Q8BY87 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp47Q8BY87 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm3555-201ENSMUST00000160287 1395 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm8177-201ENSMUST00000181591 1336 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm13183-201ENSMUST00000118615 789 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm22342-201ENSMUST00000122647 298 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm29784-201ENSMUST00000196217 406 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 AC148328.2-201ENSMUST00000216960 262 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 CT009711.2-201ENSMUST00000225352 934 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm24621-201ENSMUST00000082679 140 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp47Q8BY87 Gm14935-201ENSMUST00000121528 1708 ntBASIC9.67□□□□□ -0.86
Usp47Q8BY87 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms