Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Calr-ps-201ENSMUST00000121776 485 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm23674-201ENSMUST00000157473 131 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm23891-201ENSMUST00000158114 138 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm26037-201ENSMUST00000158150 311 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Igkv4-83-201ENSMUST00000196933 334 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm43850-201ENSMUST00000202021 578 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Gm6436-201ENSMUST00000077163 451 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Olfr519-201ENSMUST00000084752 960 ntBASIC9.71□□□□□ -0.86
Usp54Q8BL06 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp54Q8BL06 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm37786-201ENSMUST00000191714 3225 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm44704-201ENSMUST00000208963 1990 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm12021-201ENSMUST00000121061 1746 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm26079-201ENSMUST00000104066 133 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Gm37072-201ENSMUST00000194570 837 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.7□□□□□ -0.86
Usp54Q8BL06 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp54Q8BL06 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm15149-201ENSMUST00000119370 360 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm27853-201ENSMUST00000184176 250 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC9.69□□□□□ -0.86
Usp54Q8BL06 AC131795.1-201ENSMUST00000219632 426 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 Vmn1r41-205ENSMUST00000227630 827 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 n-R5s58-201ENSMUST00000093682 119 ntBASIC9.69□□□□□ -0.86
Usp54Q8BL06 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp54Q8BL06 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.68□□□□□ -0.86
Usp54Q8BL06 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm8837-201ENSMUST00000161037 1107 ntBASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm43354-201ENSMUST00000196862 346 ntBASIC9.68□□□□□ -0.86
Usp54Q8BL06 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC9.68□□□□□ -0.86
Usp54Q8BL06 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp54Q8BL06 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms