Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm8812-201ENSMUST00000118496 412 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm15484-201ENSMUST00000118871 828 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm11198-201ENSMUST00000119771 974 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm15096-201ENSMUST00000121918 878 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm24130-201ENSMUST00000158536 151 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm22569-201ENSMUST00000175545 124 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm27972-201ENSMUST00000184720 137 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm5147-201ENSMUST00000185999 794 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm43725-201ENSMUST00000200122 369 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm19217-201ENSMUST00000218238 328 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm15054-201ENSMUST00000117393 281 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm13414-201ENSMUST00000117516 727 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm14727-201ENSMUST00000118526 525 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm12944-201ENSMUST00000119262 463 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm8916-201ENSMUST00000119732 949 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm11257-201ENSMUST00000121313 315 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm14721-201ENSMUST00000121381 525 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm23740-201ENSMUST00000157385 100 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm28894-201ENSMUST00000185214 615 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm8524-201ENSMUST00000186232 379 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm3121-201ENSMUST00000187086 406 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm8101-201ENSMUST00000192796 478 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm37328-201ENSMUST00000193191 640 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm37369-201ENSMUST00000194179 615 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm43656-201ENSMUST00000197882 434 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm43926-201ENSMUST00000203978 430 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm44971-201ENSMUST00000206192 337 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.28□□□□□ -1.24
Ccdc40Q8BI79 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Ccdc40Q8BI79 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.27□□□□□ -1.24
Ccdc40Q8BI79 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms