Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm12438-201ENSMUST00000122034 336 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm26037-201ENSMUST00000158150 311 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm26509-201ENSMUST00000180947 948 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm21392-201ENSMUST00000182950 972 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm18799-201ENSMUST00000189104 913 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 BC049739-201ENSMUST00000202626 660 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm18838-201ENSMUST00000204855 886 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm17950-201ENSMUST00000214617 646 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Nup98Q6PFD9 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm24272-201ENSMUST00000102329 98 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm23311-201ENSMUST00000104152 134 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm11920-201ENSMUST00000118491 563 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm12152-201ENSMUST00000122465 684 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm28918-201ENSMUST00000188822 699 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm45448-201ENSMUST00000211739 209 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Olfr687-201ENSMUST00000098154 938 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Gm15903-202ENSMUST00000199631 3518 ntBASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Nup98Q6PFD9 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Mir1960-201ENSMUST00000157488 78 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm27602-201ENSMUST00000183861 111 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Grik1-209ENSMUST00000227986 2942 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 168.5 ms