Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.24□□□□□ -1.09
Vps54Q5SPW0 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Vps54Q5SPW0 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps54Q5SPW0 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps54Q5SPW0 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm13462-201ENSMUST00000121472 961 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm12778-201ENSMUST00000122341 333 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm8609-201ENSMUST00000182967 998 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm38030-201ENSMUST00000192376 475 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm5708-201ENSMUST00000196289 886 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm18040-201ENSMUST00000217922 827 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps54Q5SPW0 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm13732-201ENSMUST00000117753 535 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm13930-201ENSMUST00000118569 368 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm23757-201ENSMUST00000158353 100 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm25717-201ENSMUST00000158631 353 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm9127-201ENSMUST00000188041 985 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm34144-201ENSMUST00000197039 259 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm43089-201ENSMUST00000199162 275 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Mir106b-201ENSMUST00000083580 82 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Vps54Q5SPW0 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Vps54Q5SPW0 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm15158-201ENSMUST00000120577 570 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm28064-201ENSMUST00000185639 858 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gm30646-201ENSMUST00000207662 180 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms