Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm14772-201ENSMUST00000116562 514 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm11212-201ENSMUST00000118337 618 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm7494-201ENSMUST00000121248 441 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm13221-201ENSMUST00000121712 430 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm11609-201ENSMUST00000121926 793 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm11188-201ENSMUST00000122382 388 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm17786-201ENSMUST00000182000 427 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm21877-201ENSMUST00000185640 694 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm7436-201ENSMUST00000187229 391 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm9114-201ENSMUST00000188558 997 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm17771-201ENSMUST00000194477 1147 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm37901-201ENSMUST00000195107 514 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm43556-201ENSMUST00000196186 681 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm43765-201ENSMUST00000196303 893 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm43147-201ENSMUST00000196944 542 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Clec2j-202ENSMUST00000203658 606 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm44245-201ENSMUST00000204304 232 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm7546-202ENSMUST00000211354 275 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm19987-201ENSMUST00000216339 499 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm5654-201ENSMUST00000217787 475 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm46317-201ENSMUST00000221103 393 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm24696-201ENSMUST00000083878 134 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.45□□□□□ -1.38
Col8a1Q00780 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.45□□□□□ -1.38
Col8a1Q00780 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col8a1Q00780 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms