Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm22882-201ENSMUST00000157749 124 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm23891-201ENSMUST00000158114 138 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm17129-201ENSMUST00000168168 505 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm25025-201ENSMUST00000175018 111 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm7734-201ENSMUST00000182832 1011 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Mir6337-201ENSMUST00000184194 105 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm3841-201ENSMUST00000191399 451 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC5.84□□□□□ -1.47
Ufd1P70362 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm6562-201ENSMUST00000221903 464 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 AC100209.1-201ENSMUST00000225562 409 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gnpnat1-202ENSMUST00000226276 710 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 AC121542.2-201ENSMUST00000227529 400 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 AC137950.1-201ENSMUST00000228553 515 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ufd1P70362 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Elobl-202ENSMUST00000082339 300 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.84□□□□□ -1.48
Ufd1P70362 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ufd1P70362 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ufd1P70362 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.84□□□□□ -1.48
Ufd1P70362 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ufd1P70362 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.84□□□□□ -1.48
Ufd1P70362 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ufd1P70362 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm23358-201ENSMUST00000103887 110 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm15203-201ENSMUST00000117668 455 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm5759-201ENSMUST00000119203 811 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm23094-201ENSMUST00000157551 322 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm17051-201ENSMUST00000170787 487 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm26570-201ENSMUST00000180672 342 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm7593-201ENSMUST00000187246 644 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm8925-201ENSMUST00000197212 763 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm43013-201ENSMUST00000198216 247 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC5.83□□□□□ -1.48
Ufd1P70362 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC5.83□□□□□ -1.48
Ufd1P70362 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 AC152946.3-201ENSMUST00000219424 280 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm18362-201ENSMUST00000221786 529 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC5.83□□□□□ -1.48
Ufd1P70362 AC164978.2-201ENSMUST00000226645 857 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Snora21-201ENSMUST00000082967 137 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm7731-201ENSMUST00000091759 470 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ufd1P70362 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms