Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Rfx3P48381 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx3P48381 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx3P48381 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Rfx3P48381 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.24□□□□□ -1.41
Rfx3P48381 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx3P48381 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm25593-201ENSMUST00000102272 96 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm25546-201ENSMUST00000103977 132 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm15739-201ENSMUST00000118049 872 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm14727-201ENSMUST00000118526 525 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm12740-201ENSMUST00000118794 308 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm14721-201ENSMUST00000121381 525 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm24057-201ENSMUST00000158616 302 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm24369-201ENSMUST00000175387 96 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Mir378d-201ENSMUST00000184232 110 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm28117-201ENSMUST00000188472 371 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm22711-202ENSMUST00000197029 135 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm43926-201ENSMUST00000203978 430 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx3P48381 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rfx3P48381 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Diaph3-204ENSMUST00000226254 682 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm6166-201ENSMUST00000098689 409 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.23□□□□□ -1.41
Rfx3P48381 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rfx3P48381 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Rfx3P48381 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.23□□□□□ -1.41
Rfx3P48381 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rfx3P48381 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.23□□□□□ -1.41
Rfx3P48381 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx3P48381 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx3P48381 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx3P48381 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rfx3P48381 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.22□□□□□ -1.41
Rfx3P48381 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.22□□□□□ -1.41
Rfx3P48381 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.22□□□□□ -1.41
Rfx3P48381 Gm14279-201ENSMUST00000117142 332 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm10243-201ENSMUST00000117571 333 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm11972-201ENSMUST00000118514 389 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm9697-201ENSMUST00000147052 997 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.22□□□□□ -1.41
Rfx3P48381 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx3P48381 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.22□□□□□ -1.41
Rfx3P48381 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.22□□□□□ -1.41
Rfx3P48381 Gm36932-201ENSMUST00000195226 929 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm42580-201ENSMUST00000197223 753 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm43656-201ENSMUST00000197882 434 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm44258-201ENSMUST00000204925 301 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.22□□□□□ -1.41
Rfx3P48381 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms