Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.78□□□□□ -1
Rfx1P48377 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.78□□□□□ -1
Rfx1P48377 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Rfx1P48377 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.77□□□□□ -1
Rfx1P48377 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.77□□□□□ -1
Rfx1P48377 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rfx1P48377 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
Rfx1P48377 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm12710-201ENSMUST00000119011 216 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm22275-201ENSMUST00000122470 310 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm26351-201ENSMUST00000157532 232 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm24773-201ENSMUST00000158513 99 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm23387-201ENSMUST00000158586 107 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm10012-202ENSMUST00000170379 372 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm4246-201ENSMUST00000172822 216 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm22132-201ENSMUST00000175316 100 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm20702-201ENSMUST00000176181 460 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm28645-201ENSMUST00000185859 564 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm18970-201ENSMUST00000186040 938 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm20561-201ENSMUST00000188131 292 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm29471-201ENSMUST00000190527 700 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm37543-201ENSMUST00000192443 1031 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm35108-201ENSMUST00000194321 699 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm37929-201ENSMUST00000195116 493 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm38360-201ENSMUST00000195130 454 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm33191-201ENSMUST00000195604 699 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm19182-201ENSMUST00000207139 577 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm8804-201ENSMUST00000212292 798 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.77□□□□□ -1.01
Rfx1P48377 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Rfx1P48377 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rfx1P48377 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Rfx1P48377 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.77□□□□□ -1.01
Rfx1P48377 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.77□□□□□ -1.01
Rfx1P48377 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm12096-201ENSMUST00000121149 829 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.76□□□□□ -1.01
Rfx1P48377 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Mir1983-201ENSMUST00000157523 132 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Gm17051-201ENSMUST00000170787 487 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Gm8696-201ENSMUST00000174777 385 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Rfx1P48377 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms