Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HttP42859 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Gm11852-201ENSMUST00000120806 222 ntBASIC7.03□□□□□ -1.28
HttP42859 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HttP42859 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm28943-201ENSMUST00000186187 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28736-201ENSMUST00000186257 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm29401-201ENSMUST00000186690 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm29178-204ENSMUST00000186784 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28589-201ENSMUST00000186991 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28936-201ENSMUST00000187153 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm29121-201ENSMUST00000187611 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28243-201ENSMUST00000187801 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28844-202ENSMUST00000187977 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm29058-201ENSMUST00000189510 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm29624-201ENSMUST00000190018 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28780-201ENSMUST00000190223 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28969-211ENSMUST00000190992 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm28990-207ENSMUST00000191219 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm36468-201ENSMUST00000192119 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm31572-201ENSMUST00000193341 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm37322-201ENSMUST00000193409 337 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm30175-201ENSMUST00000194173 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm30858-201ENSMUST00000195516 615 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.03□□□□□ -1.28
HttP42859 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.03□□□□□ -1.28
HttP42859 Gm5229-201ENSMUST00000039375 354 ntBASIC7.03□□□□□ -1.28
HttP42859 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.03□□□□□ -1.28
HttP42859 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.28
HttP42859 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
HttP42859 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
HttP42859 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
HttP42859 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.02□□□□□ -1.29
HttP42859 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HttP42859 Gm20236-201ENSMUST00000193037 4540 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm37094-201ENSMUST00000193352 4540 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.02□□□□□ -1.29
HttP42859 Gm24216-201ENSMUST00000158259 117 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm29159-201ENSMUST00000187969 379 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm7626-201ENSMUST00000195801 353 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm43148-201ENSMUST00000198237 520 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.02□□□□□ -1.29
HttP42859 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HttP42859 Gm10688-201ENSMUST00000214985 520 ntBASIC7.02□□□□□ -1.29
HttP42859 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.02□□□□□ -1.29
HttP42859 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.02□□□□□ -1.29
HttP42859 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HttP42859 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC7.02□□□□□ -1.29
HttP42859 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC7.02□□□□□ -1.29
HttP42859 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm8761-201ENSMUST00000121507 955 ntBASIC7.02□□□□□ -1.29
HttP42859 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.02□□□□□ -1.29
HttP42859 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.02□□□□□ -1.29
HttP42859 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HttP42859 Gm43554-201ENSMUST00000199987 186 ntBASIC7.02□□□□□ -1.29
HttP42859 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.02□□□□□ -1.29
HttP42859 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.02□□□□□ -1.29
HttP42859 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.02□□□□□ -1.29
HttP42859 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HttP42859 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.02□□□□□ -1.29
HttP42859 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
HttP42859 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.02□□□□□ -1.29
HttP42859 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.02□□□□□ -1.29
HttP42859 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC7.02□□□□□ -1.29
HttP42859 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HttP42859 Gm36401-201ENSMUST00000194255 2028 ntBASIC7.02□□□□□ -1.29
HttP42859 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm19125-201ENSMUST00000188408 1383 ntBASIC7.01□□□□□ -1.29
HttP42859 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.01□□□□□ -1.29
HttP42859 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm19065-202ENSMUST00000203910 1165 ntBASIC7.01□□□□□ -1.29
HttP42859 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.01□□□□□ -1.29
HttP42859 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms