Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm12477-201ENSMUST00000121221 571 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm24228-201ENSMUST00000158829 129 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm17022-201ENSMUST00000166415 922 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Mir199b-201ENSMUST00000175066 110 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Mir7058-201ENSMUST00000184637 75 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm28958-201ENSMUST00000185864 703 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm4525-201ENSMUST00000198831 254 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm5528-201ENSMUST00000076314 480 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm26419-201ENSMUST00000104272 133 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm26417-201ENSMUST00000104274 135 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm23740-201ENSMUST00000157385 100 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm8715-201ENSMUST00000162728 531 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Mir6241-201ENSMUST00000184225 103 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm43725-201ENSMUST00000200122 369 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm44147-201ENSMUST00000204658 94 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm6681-201ENSMUST00000205215 607 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm44982-201ENSMUST00000208795 471 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp6P0C0A3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Chmp6P0C0A3 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms