Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm43576-201ENSMUST00000197937 871 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 AC153557.1-201ENSMUST00000217697 403 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clrn2B2RVW2 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Clrn2B2RVW2 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.02□□□□□ -1.12
Clrn2B2RVW2 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.02□□□□□ -1.12
Clrn2B2RVW2 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clrn2B2RVW2 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm5793-201ENSMUST00000119393 630 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm15181-201ENSMUST00000120142 177 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm25342-201ENSMUST00000157459 122 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm26455-201ENSMUST00000175300 92 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 n-R5s109-201ENSMUST00000179195 119 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm26570-201ENSMUST00000180672 342 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm37328-201ENSMUST00000193191 640 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm43555-201ENSMUST00000196588 310 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm6990-201ENSMUST00000086830 348 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.02□□□□□ -1.13
Clrn2B2RVW2 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm38277-201ENSMUST00000195172 1367 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm23748-201ENSMUST00000104227 131 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm13462-201ENSMUST00000121472 961 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm4660-201ENSMUST00000131499 403 ntBASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Clrn2B2RVW2 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms