Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm14580-201ENSMUST00000119122 718 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15149-201ENSMUST00000119370 360 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm14712-201ENSMUST00000120195 772 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm4997-201ENSMUST00000154056 360 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm23674-201ENSMUST00000157473 131 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Mir5107-201ENSMUST00000175586 88 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15257-201ENSMUST00000177680 883 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15252-201ENSMUST00000177750 883 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15256-201ENSMUST00000177793 883 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm15260-201ENSMUST00000179402 883 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm45122-201ENSMUST00000206376 784 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm44705-201ENSMUST00000206719 339 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm33312-201ENSMUST00000222443 332 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm25515-201ENSMUST00000083858 157 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Olfr519-201ENSMUST00000084752 960 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm12099-201ENSMUST00000118660 750 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm25387-201ENSMUST00000157813 132 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm28353-201ENSMUST00000186482 570 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm28533-201ENSMUST00000186741 570 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm7492-201ENSMUST00000201745 725 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Gm45739-201ENSMUST00000213094 388 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col4a6B1AVK5 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a6B1AVK5 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms