Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm12140-201ENSMUST00000121214 544 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm37809-201ENSMUST00000195050 931 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm45122-201ENSMUST00000206376 784 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Gm22351-201ENSMUST00000083925 107 ntBASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Scn3aA2ASI5 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.65□□□□□ -1.19
Scn3aA2ASI5 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Scn3aA2ASI5 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm7212-201ENSMUST00000120817 348 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm13642-201ENSMUST00000121697 381 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm23276-201ENSMUST00000157913 138 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm43383-201ENSMUST00000195981 469 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm25660-201ENSMUST00000158470 104 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm28586-201ENSMUST00000189857 456 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm37189-201ENSMUST00000192131 298 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm43048-201ENSMUST00000196101 388 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Gm7731-201ENSMUST00000091759 470 ntBASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Scn3aA2ASI5 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms