Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cdk5rap3Q99LM2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm12219-201ENSMUST00000119198 443 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm6610-201ENSMUST00000186324 358 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm37585-201ENSMUST00000195440 280 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm6077-201ENSMUST00000196008 499 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.16□□□□□ -1.26
Cdk5rap3Q99LM2 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm7831-201ENSMUST00000117990 552 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm13196-201ENSMUST00000118297 379 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm15362-201ENSMUST00000121459 388 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm6061-201ENSMUST00000175860 492 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm18349-201ENSMUST00000187440 904 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm8920-201ENSMUST00000196153 924 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm3103-201ENSMUST00000198073 752 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.15□□□□□ -1.26
Cdk5rap3Q99LM2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms