Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm17170-201ENSMUST00000112785 316 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm14248-201ENSMUST00000117790 544 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm11558-201ENSMUST00000118454 459 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm14631-201ENSMUST00000119067 594 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm11338-201ENSMUST00000120086 1160 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm24286-201ENSMUST00000157632 128 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm9167-201ENSMUST00000182469 962 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm45399-201ENSMUST00000209955 1016 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 AC122356.2-201ENSMUST00000226962 820 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm5815-201ENSMUST00000050706 1185 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm23238-201ENSMUST00000083007 164 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup35Q8R4R6 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Mir763-201ENSMUST00000103249 120 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm6743-201ENSMUST00000117345 1066 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm12321-201ENSMUST00000121485 804 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm20797-201ENSMUST00000177894 383 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm5261-201ENSMUST00000185860 713 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm28958-201ENSMUST00000185864 703 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm37017-201ENSMUST00000195266 747 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm7631-201ENSMUST00000196935 1100 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm30196-201ENSMUST00000208957 160 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 Gm7392-201ENSMUST00000217815 345 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 CT009556.3-201ENSMUST00000226173 513 ntBASIC5.51□□□□□ -1.53
Nup35Q8R4R6 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms