Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm25273-201ENSMUST00000104295 115 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm25276-201ENSMUST00000104300 124 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm14755-201ENSMUST00000118037 384 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm12601-201ENSMUST00000118994 846 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm13642-201ENSMUST00000121697 381 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm14830-201ENSMUST00000121899 700 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm16248-201ENSMUST00000124238 243 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm25505-201ENSMUST00000157220 246 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Mir6337-201ENSMUST00000184194 105 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Mir6974-201ENSMUST00000184381 83 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm8304-201ENSMUST00000185744 584 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm28239-201ENSMUST00000190225 447 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm43656-201ENSMUST00000197882 434 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm45514-201ENSMUST00000211531 689 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm46231-201ENSMUST00000220152 314 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 AV026068-219ENSMUST00000224148 933 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm24613-201ENSMUST00000083266 130 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm25962-201ENSMUST00000157173 168 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm2951-201ENSMUST00000169447 490 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm28196-201ENSMUST00000187719 640 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm4545-201ENSMUST00000190797 603 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms