Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm26419-201ENSMUST00000104272 133 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm11858-201ENSMUST00000117935 838 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm14716-201ENSMUST00000120138 718 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm16284-201ENSMUST00000140995 400 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm25505-201ENSMUST00000157220 246 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm24682-201ENSMUST00000158764 137 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm22642-201ENSMUST00000175352 252 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm42673-201ENSMUST00000202676 337 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm44971-201ENSMUST00000206192 337 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm4585-201ENSMUST00000207218 452 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Mir7b-201ENSMUST00000083557 111 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm43606-201ENSMUST00000195938 3556 ntBASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup88Q8CEC0 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm27014-201ENSMUST00000182658 937 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm36758-201ENSMUST00000222594 310 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AV026068-219ENSMUST00000224148 933 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Nup88Q8CEC0 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm26417-201ENSMUST00000104274 135 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm14893-201ENSMUST00000117904 282 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm12181-201ENSMUST00000121448 531 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm10913-201ENSMUST00000133732 463 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm16102-201ENSMUST00000160955 420 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms