Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm23810-201ENSMUST00000175150 74 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm22119-201ENSMUST00000175594 99 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm6061-201ENSMUST00000175860 492 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm27507-201ENSMUST00000184199 93 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm34144-201ENSMUST00000197039 259 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm3549-201ENSMUST00000203873 794 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm7252-201ENSMUST00000223284 456 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm23485-201ENSMUST00000104181 155 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm16044-201ENSMUST00000118475 450 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm25395-201ENSMUST00000157343 272 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm23031-201ENSMUST00000157998 119 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm43546-201ENSMUST00000196721 943 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm44342-201ENSMUST00000196874 129 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm44383-201ENSMUST00000198940 129 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm42713-201ENSMUST00000202709 945 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm45136-201ENSMUST00000205793 943 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Atg4aQ8C9S8 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm11858-201ENSMUST00000117935 838 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm25556-201ENSMUST00000158077 144 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Mir8105-201ENSMUST00000184718 89 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Mir7005-201ENSMUST00000185089 69 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm21728-201ENSMUST00000188442 695 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm21889-201ENSMUST00000188487 695 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20932-201ENSMUST00000189115 694 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm21920-201ENSMUST00000190042 695 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms