Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm14904-201ENSMUST00000117067 335 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm14550-201ENSMUST00000117918 407 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm11726-201ENSMUST00000121028 424 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm22728-201ENSMUST00000158087 129 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm25717-201ENSMUST00000158631 353 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm28665-201ENSMUST00000189269 670 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm45509-201ENSMUST00000209624 1229 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm45725-201ENSMUST00000212962 337 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm17950-201ENSMUST00000214617 646 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm25724-201ENSMUST00000104531 117 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm13423-201ENSMUST00000117205 888 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm15242-201ENSMUST00000122459 283 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm26025-201ENSMUST00000158655 271 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm9114-201ENSMUST00000188558 997 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm29214-201ENSMUST00000190216 570 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm37383-201ENSMUST00000191750 745 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm36448-201ENSMUST00000199916 438 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trub1Q8C0D0 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.04□□□□□ -1.28
Trub1Q8C0D0 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms