Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm5182-201ENSMUST00000217708 6092 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm25785-201ENSMUST00000104129 125 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm13462-201ENSMUST00000121472 961 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm12101-201ENSMUST00000121590 390 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Mir1953-201ENSMUST00000157866 89 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm16112-201ENSMUST00000159075 382 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm38280-201ENSMUST00000192610 158 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 AC164295.1-201ENSMUST00000224861 186 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm15681-201ENSMUST00000137501 2704 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm37755-201ENSMUST00000195880 2179 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 AC165260.6-206ENSMUST00000223884 3698 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm22267-201ENSMUST00000104008 131 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm15750-201ENSMUST00000120970 616 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm18692-201ENSMUST00000193047 511 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm9110-201ENSMUST00000219035 617 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm24621-201ENSMUST00000082679 140 ntBASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Usp40Q8BWR4 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm43128-201ENSMUST00000202212 1621 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm36933-201ENSMUST00000194945 3071 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm13357-201ENSMUST00000120528 537 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm12451-201ENSMUST00000121636 633 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm15164-201ENSMUST00000122203 271 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms