Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Gm2505-201ENSMUST00000200413 825 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Gm32899-201ENSMUST00000219694 207 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim43aQ3TL54 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.33□□□□□ -1.24
Trim43aQ3TL54 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm22470-201ENSMUST00000104117 130 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm9697-201ENSMUST00000147052 997 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm24422-201ENSMUST00000157800 119 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Mir1981-201ENSMUST00000157934 82 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm24057-201ENSMUST00000158616 302 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Diaph3-204ENSMUST00000226254 682 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm20900-201ENSMUST00000078729 472 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm7731-201ENSMUST00000091759 470 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.32□□□□□ -1.24
Trim43aQ3TL54 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.32□□□□□ -1.24
Trim43aQ3TL54 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Mir678-201ENSMUST00000102114 84 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm11880-201ENSMUST00000117612 399 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm16044-201ENSMUST00000118475 450 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm15007-201ENSMUST00000119982 710 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm17217-201ENSMUST00000166613 469 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm3208-201ENSMUST00000168281 427 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm7991-201ENSMUST00000168668 591 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms